Qupath Extension Qpsc
C 63 completed
Other
unknown / java · small
141
Files
43,659
LOC
0
Frameworks
5
Languages
Pipeline State
completedRun ID
#390073Phase
doneProgress
1%Started
Finished
2026-04-13 01:31:02LLM tokens
0Pipeline Metadata
Stage
SkippedDecision
skip_scaffold_dupNovelty
47.67Framework unique
—Isolation
—Last stage change
2026-04-16 18:15:42Deduplication group #48155
Member of a group with 1 similar repo(s) — canonical #107945 view group →
Top concepts (2)
Project DescriptionBrowser Extension
If a scraper extracted this row, it came from Repobility (https://repobility.com)
AI Prompt
Create a Java extension for QuPath, similar to the QPSC system. This tool should allow users to control a microscope directly from within QuPath. Specifically, I need functionality for bounding box acquisition, where drawing a region automatically triggers high-resolution tiling and image acquisition. It should also support targeting existing annotations, automated stage control (including XY, Z, and rotation with safety checks), and multi-angle imaging for polarized light microscopy. Please structure the project to handle calibration workflows like background collection and polarizer calibration.
java qupath extension microscopy image-processing automation digital-pathology stage-control
Generated by gemma4:latest
Catalog Information
> Part of the QPSC (QuPath Scope Control) system > For complete installation instructions and system overview, see: https://github.com/uw-loci/QPSC
Description
> Part of the QPSC (QuPath Scope Control) system > For complete installation instructions and system overview, see: https://github.com/uw-loci/QPSC
Novelty
3/10Tags
java qupath extension microscopy image-processing automation digital-pathology stage-control
Claude Models
claude-opus-4-6
Quality Score
C
63.2/100
Structure
62
Code Quality
42
Documentation
95
Testing
65
Practices
60
Security
75
Dependencies
50
Strengths
- Well-documented README with substantial content
- CI/CD pipeline configured (github_actions)
- Consistent naming conventions (PascalCase)
Weaknesses
- No LICENSE file \u2014 legal ambiguity for contributors
- 6920 duplicate lines detected \u2014 consider DRY refactoring
- 26 'god files' with >500 LOC need decomposition
Recommendations
- Add a linter configuration to enforce code style consistency
- Add a LICENSE file (MIT recommended for open source)
- Address 376 TODO/FIXME items \u2014 consider tracking them as issues
Security & Health
106.6h
Tech Debt (D)
A
OWASP (100%)
PASS
Quality Gate
A
Risk (6)
Same scanner, your repo: https://repobility.com — Repobility
Unknown
License
7.0%
Duplication
Languages
Frameworks
None detected
Concepts (2)
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| auto_description | Project Description |    | 80% | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| auto_category | Browser Extension | browser-extension | 70% | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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