Pmsimstats2025
C+ 71 completed
Other
containerized / r · small
150
Files
46,092
LOC
0
Frameworks
7
Languages
Pipeline State
completedRun ID
#374326Phase
doneProgress
1%Started
Finished
2026-04-13 01:31:02LLM tokens
0Pipeline Metadata
Stage
CatalogedDecision
proceedNovelty
57.47Framework unique
—Isolation
—Last stage change
2026-05-10 03:35:34Deduplication group #49788
Member of a group with 4 similar repo(s) — canonical #105495 view group →
Top concepts (2)
Project DescriptionData/ML
Generated by Repobility's multi-pass static-analysis pipeline (https://repobility.com)
AI Prompt
Create an R package simulation study focused on N-of-1 clinical trials. I need to compare several trial designs, specifically Hybrid, Crossover, Open-Label, and Parallel, while modeling biomarker-treatment interactions and carryover effects. The simulation should support mixed-effects analysis using `lme` models with continuous-time AR(1) correlation. Please include functionality for validating positive definiteness of the sigma matrix and provide scripts to generate power heatmaps for visualization.
r statistics simulation clinical-trials biostatistics mixed-effects-models n-of-1
Generated by gemma4:latest
Catalog Information
pmsimstats2025 is an N-of-1 clinical trial simulation study comparing multiple trial designs (Hybrid, Crossover, Open-Label, Parallel) with a focus on statistical power when biomarker-treatment interactions exist and carryover effects are present.
Description
pmsimstats2025 is an N-of-1 clinical trial simulation study comparing multiple trial designs (Hybrid, Crossover, Open-Label, Parallel) with a focus on statistical power when biomarker-treatment interactions exist and carryover effects are present.
Novelty
3/10Tags
r statistics simulation clinical-trials biostatistics mixed-effects-models n-of-1
Claude Models
claude-opus-4-6
Quality Score
C+
71.2/100
Structure
66
Code Quality
66
Documentation
68
Testing
65
Practices
78
Security
100
Dependencies
50
Strengths
- CI/CD pipeline configured (github_actions)
- Consistent naming conventions (snake_case)
- Good security practices \u2014 no major issues detected
- Containerized deployment (Docker)
- Properly licensed project
Weaknesses
- 1849 duplicate lines detected \u2014 consider DRY refactoring
- 15 'god files' with >500 LOC need decomposition
Recommendations
- Add a linter configuration to enforce code style consistency
Security & Health
9.6h
Tech Debt (A)
A
OWASP (100%)
PASS
Quality Gate
A
Risk (0)
Repobility · open methodology · https://repobility.com/research/
GPL-3.0
License
44.3%
Duplication
Languages
Frameworks
None detected
Concepts (2)
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